API

μGUIDE configuration

create_config_uGUIDE(...[, ...])

Create a configuration file for the inference and microstructure parameters estimation.

save_config_uGUIDE(config[, savefile, ...])

Save a configuration dictionary used for the inference and microstructure parameters estimation in a pkl file.

load_config_uGUIDE(savefile)

Load μGUIDE configuration used for the inference and microstructure parameters estimation stored in a pkl file.

Inference

run_inference(theta, x, config[, plot_loss, ...])

Run inference given a training dataset.

Microstructure parameters estimation

estimate_microstructure(x, config[, ...])

Estimate microstructure parameters given an observed diffusion MRI signal.